European Molecular Biology Laboratory (EMBL), Germany, Germany invites online Application for various Postdoctoral Fellowship in their different Departments. We are providing a list of Postdoc Fellowship positions available at European Molecular Biology Laboratory (EMBL), Germany, Germany.
Eligible candidate may Apply as soon as possible.
(01) Postdoctoral Fellowship Position
Postdoc Fellowship Position summary/title: Postdoctoral Fellow: X-ray Imaging / 3D image analysis
The position is a 2-year PostDoc position starting (at the earliest) on 01.01.2025. A key focus of this position is the utilisation of the High Throughput Tomography (HiTT) setup at EMBL’s P14 beamline. This includes the development of sample handling processes and data collection techniques for the imaging of plant samples which have been grown at the University of Aarhus. A major aspect of your work will be the handling, curation and analysis of Terabytes of X-ray tomography data in close collaboration with a PostDoc at DTU. This includes the creation of workflows for (semi)-automated segmentation of bacterial infection, as well as the training of AI-based models.
Deadline : 24 November 2024
(02) Postdoctoral Fellowship Position
Postdoc summary/title: Postdoctoral Fellow – Birney Research Group
You will lead on a project funded by the EMBL Human Ecosystems transversal theme programme to investigate gene x drug exposure x phenotype relationships at scale over continuous time in large human cohorts. The successful candidate will join the Birney research team at EMBL-EBI working closely with Open Targets to apply and further develop an AI framework based on generative transformers (Delphi) for multi-disease and multi-drug modelling across continuous time in human populations. Some of the initial work will include incorporating prescription exposome data into Delphi and developing a pharmacogenetic analysis model, correlating genetic variation with exposure to drug outcomes based upon known associations and exploring novel genetic-drug exposure-phenotype associations.
Drug exposure is a strong environmental modifier and is intrinsically linked to disease risk and outcome in human populations. There remains many open questions and undiscovered interactions between drug exposure, genetics and disease onset/outcome that can be investigated using large human cohorts with detailed health records and genetics, providing the candidate with lots of research opportunities and potential novel findingsOne key factor which makes this type of research more powerful is recent innovations in generative AI making it possible to model all disease and other important factors, such as drug exposure and genetics at the same time, mapped to the same internal space (embedding) and across continuous time. This not only allows us to assess the overall impact of genetics and exposures on disease risk across a population but also provides a framework for assessing at which time across a life course these effects most strongly manifest.
Deadline : 8 December 2024
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(03) Postdoctoral Fellowship Position
Postdoc Fellowship Position summary/title: Postdoctoral Fellow in Epigenetics
We seek an ERC-funded postdoctoral scientist to investigate the mechanistic function of chromatin modifications in somatic and/or germ cells. The successful candidate will work on a cutting-edge experimental research project using high-throughput perturbation screening, epigenetic editing, multi-omics, and organoids. The objective is to uncover the regulatory logic by which distinct chromatin states shape gene expression patterns in health and disease, and the underlying mechanisms. You will enjoy substantial freedom (if desired) to follow curiosity-driven hypotheses, based on novel screening datasets.
Deadline : 9 December 2024
(04) Postdoctoral Fellowship Position
Postdoc Fellowship Position summary/title: OSCARS Postdoctoral Fellowship: Tracking and Sharing Data Provenance with RO-Crate in Lab Integrated Data (LabID-PROV)
This postdoctoral position is funded by OSCARS, a Horizon Europe project that fosters the uptake of Open Science in Europe by consolidating the achievements of world-class European RIs in the ESFRI roadmap and beyond into lasting interdisciplinary FAIR data services and working practices across scientific disciplines and communities (https://oscars-project.eu/about-oscars). The successful candidate will be the key actor of the LabID-PROV project (https://www.oscars-project.eu/projects/labid-prov-tracking-and-sharing-data-provenance-ro-crate-lab-integrated-data).
Lab Integrated Data (LabID, https://gbcs.embl.de/labid), is a web-based integrated platform for research data management featuring sample and dataset management, an inventory management system and an electronic lab notebook. It is designed to help individual scientists, research groups and core facilities better manage, annotate and share their experiments, assays, samples and datasets actively according to FAIR principles. While in LabID processed data can already be stored and connected to its primary data, associated assays (e.g. sequencing, light or electron microscopy) and original samples, accurate modelling of both Workflow (WF) and Workflow Run (an object modelling the execution a WF and gathering input & outputs datasets as well as the execution metadata e.g. parameters, configurations…) is currently lacking. In this project, we proposed to extend the LabID data model to include these concepts, offering a unified application to manage derived data provenance independently of analysis procedure and platform, and providing a concrete solution to ensure the traceability of derived data. To this end, we will use and integrate with several EOSC-Life resources e.g. WorkflowHub, RO-Crate, Galaxy, Zenodo and Workflow Run RO-Crate profiles to streamline derived data import and export.
Deadline :15 December 2024
(05) Postdoctoral Fellowship Position
Postdoc Fellowship Position summary/title: Postdoctoral Fellow – Computational Analysis of Environmental Microbiome Data
We are seeking a highly motivated computational biologist to join the research group of Peer Bork within the Molecular Systems Biology Unit as a postdoctoral fellow. This bioinformatics group works on a wide range of topics with a current focus on microbiome analysis in ecosystems like the human gut and the ocean. Within the TREC (Traversing European Coastlines) project, we have gathered more than 3000 soil, sediment and water samples, and are currently analysing the resulting microbiome and multi-omics data. Additional data have been gathered within the EU-funded BIOcean5D project, where we are analysing global biodiversity patterns, and in our efforts to integrate public metagenomic data (e.g. in the SPIRE database) and the corresponding contextual data.
Deadline : 15 December 2024
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About The European Molecular Biology Laboratory (EMBL), Germany – Official Website
The European Molecular Biology Laboratory (EMBL) is a molecular biology research institution supported by 27 member states, two prospect states, and one associate member state. EMBL was created in 1974 and is an intergovernmental organization funded by public research money from its member states. Research at EMBL is conducted by approximately 85 independent groups covering the spectrum of molecular biology. The list of independent groups at EMBL can be found at www.embl.org. The Laboratory operates from six sites: the main laboratory in Heidelberg, and sites in Hinxton (the European Bioinformatics Institute (EBI), in England), Grenoble (France), Hamburg (Germany), Rome (Italy) and Barcelona (Spain). EMBL groups and laboratories perform basic research in molecular biology and molecular medicine as well as train scientists, students, and visitors. The organization aids in the development of services, new instruments and methods, and technology in its member states. Israel is the only full member state located outside Europe.
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